Lecture Materials for Computational Genomics, Spring 2004

• Lecture 1, Overview and Computing Concepts (Casavant)

• Lecture 2, Review of Molecular Biology & Genetics (Scheetz)

• Lecture 3, Advanced Topics in Perl, BioPerl (Bair)

• Lecture 4, Sequence Analysis: Strategies and Methods (Casavant)

• Lecture 5, Advanced Topics in Perl: DBI, OO (Bair)

• Lecture 6, Protein Structure and Domain Finding (Casavant)

• HMMER demo(Casavant)

• Lecture 7, part A, Genome and Transcriptome Analysis, Comparative Genomics (Casavant)

• Lecture 7, part B, Genome and Transcriptome Analysis, Comparative Genomics (Scheetz)

• Lecture 8, Promoter and mRNA prediction (Bair)

• Lecture 9, Phylogenetic and Evolution (Scheetz)

• Lecture 10, Microarry Background (Assouline)

• Lecture 11, Microarry Analysis: expression, image & normalization (Assouline)

• Lecture 12, Microarry Clustering (Assouline)

• Lecture 13, Microarry Probe Selection & Technique (Assouline)

• Lecture 14, System Biology (Bair)

  
  

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