| Date | Starting Time | Topics | Instructor |
| Jan. 20, 2004 | 5:15pm | Overview of expectations, evaluations methods, and subject matter. General overview of bioinformatics/computing | Prof. Casavant |
| Jan. 27, 2004 | 5:15pm | Review of Molecular Biology and Genetics | Prof. Scheetz |
| Feb. 3, 2004 | 5:15pm | Advanced topics in Perl, BioPerl | Dr. Bair |
| Feb. 10, 2004 | 5:15pm | Sequence analysis: strategies and methods | Prof. Casavant |
| Feb. 17, 2004 | 5:15pm | Advanced topics in Perl. DBI OO | Dr. Bair |
| Feb. 24, 2004 | 6:00pm | Protein Structure and Domain Finding | Prof. Casavant |
| Mar. 2, 2004 | 5:15pm | Genome and Transcriptome Analysis, Comparative Genomics | Prof. Scheetz / Prof. Casavant |
| Mar. 9, 2004 | 5:15pm | Promoter and mRNA prediction | Dr. Bair |
| Mar. 16, 2004 | 5:15pm | Spring Break!! |
| Mar. 23, 2004 | 5:15pm | Phylogenetics and Evolution | Prof. Scheetz |
| Mar. 30, 2004 | 5:30pm | Midterm presentations: present background and project outlines | Class |
| Apr. 6, 2004 | 5:15pm | Microarray Background | Prof. Assouline |
| Apr. 13, 2004 | 5:15pm | Microarray Analysis: expression and image, normalization | Prof. Assouline |
| Apr. 20, 2004 | 5:15pm | Microarray clustering | Prof. Assouline |
| Apr. 27 2004 | 5:15pm | Microarray probe selection, technique | Prof. Assouline |
| May 4, 2004 | 5:15pm | Systems Biology Overview: what is it, current problems, pathway prediction | Prof. Casavant / Dr. Bair |
| May 11, 2004 | 5:15pm | Final Project Presentations | Class |