Recent breakthroughs in computer technology, the life sciences and medicine have served as catalysts in the advancement of the Human Genome Project. As we enter the ``post-genomic'' era, the potential to exploit new data and technologies has created a new frontier in medical and ecological research that offers the promise to dramatically improve our world and fight disease. There is a tremendous opportunity to continue the marriage of bioscience and technology through further collaborations between biologists, medical researchers and computer engineers.
The
Engineers bring a special
competency to bear on research with their health science colleagues. Basic
engineering principles such as design, instrumentation, prototyping,
optimization, and high-performance computing all have dramatic applications to
the study of molecular biology and medicine, and often are a key element in
advancing such research. A recent
example is the discovery of more than 50,000 new genes in humans, mice, and
rats. The large-scale annotation of these sets of genes has made a substantial
contribution to the worldwide repositories of genome data. In addition, large-scale studies of the
expression patterns of these genes, and the elucidation of the biological
pathways in which their expression is induced has been rapidly accelerated by
the use of large-scale, distributed database technologies. Methods in
artificial intelligence that exploit network-based collaboration among teams of
experts dispersed around the world are accelerating the isolation of genetic
mutations that hold the key to beginning to understand complex genetic
diseases. Advanced techniques employing Bayesian and Markov statistical
techniques for searching multi-gigabyte databases of raw genomic data have
been, and continue to be employed to identify candidate genes which may carry
the mutations at the root of diseases such as Cystic Fibrosis, Hypertension,
Obesity, Autism, Macular Degeneration,
Birth Defects, Heart Disease, and Neurological Disorders, to mention only a
few.
For the past six years Professors Tom Casavant (Electrical & Computer Engineering) M. Bento Soares (Biochemistry and Genetics) Val. C. Sheffield (Pediatrics and Genetics) and Edwin Stone (Ophthalmology and Genetics) have crossed academic disciplines to create ground-breaking research in the area of applied computational science within genomics, genetics and molecular biology. These efforts have included high-throughput genotyping, web-based tools for genetic linkage analysis, cDNA/EST sequencing, gene discovery and mapping, and most recently, micro-array hybridization and gene expression. To date, this inter-disciplinary research team has generated more than $35 million in external funding to advance this research. As a result, this team has become recognized worldwide for its contributions to the Human Genome Project. In addition, they have become poised to deploy some of the most valuable human resources engaged in this work.